scSLAT.viz.multi_dataset.matching_2d

scSLAT.viz.multi_dataset.matching_2d(matching, ref, src, biology_meta, topology_meta, spot_size=5, title='2D matching', save=None)

Visualize the matching result in 2D space

Parameters:

• matching (numpy.ndarray) – matching result

• ref (anndata._core.anndata.AnnData) – reference dataset

• src (anndata._core.anndata.AnnData) – target dataset

• biology_meta (str) – celltype meta colname of adata.obs

• topology_meta (str) – region meta colname of adata.obs

• spot_size (typing.Optional[int]) – size of spot for visualization

• title (typing.Optional[str]) – plot title

• save (typing.Optional[str]) – save file name (None for not save)

Return type:

None