scSLAT.model.loaddata.Transfer_pyg_Data

scSLAT.model.loaddata.Transfer_pyg_Data(adata, feature='PCA')

Transfer an adata with spatial info into PyG dataset (only for test)

Parameters:

• adata (anndata._core.anndata.AnnData) – Anndata object

• feature (typing.Optional[str]) – use which data to build graph - PCA (default)

• Note –

• ---------- –

• yet (Only support 'Spatial_Net' which store in adata.uns) –

Return type:

torch_geometric.data.data.Data