scSLAT.model.loaddata.Transfer_pyg_Data

scSLAT.model.loaddata.Transfer_pyg_Data(adata, feature='PCA')

Transfer an adata with spatial info into PyG dataset (only for test)

Return type:

torch_geometric.data.data.Data

Parameters:

adata

Anndata object

feature

use which data to build graph - PCA (default)

Note:

Only support ‘Spatial_Net’ which store in adata.uns yet